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Reconstruction of partially sampled multi-band images - Application to EELS microscopy

Monier, Etienne and Oberlin, Thomas and Brun, Nathalie and Tencé, Marcel and De Frutos, Maria and Dobigeon, Nicolas Reconstruction of partially sampled multi-band images - Application to EELS microscopy. (2018) IEEE Transactions on Computational Imaging, 4 (4). 585-598. ISSN 2333-9403

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Official URL: https://doi.org/10.1109/TCI.2018.2866961

Abstract

Electron microscopy has shown to be a very powerful tool to map the chemical nature of samples at various scales down to atomic resolution. However, many samples can not be analyzed with an acceptable signal-to-noise ratio because of the radiation damage induced by the electron beam. This is particularly crucial for electron energy loss spectroscopy (EELS) which acquires spectral-spatial data and requires high beam intensity. Since scanning transmission electron microscopes (STEM) are able to acquire data cubes by scanning the electron probe over the sample and recording a spectrum for each spatial position, it is possible to design the scan pattern and to sample only specific pixels. As a consequence, partial acquisition schemes are now conceivable, provided a reconstruction of the full data cube is conducted as a post-processing step. This paper proposes two reconstruction algorithms for multi-band images acquired by STEM-EELS which exploits the spectral structure and the spatial smoothness of the image. The performance of the proposed schemes is illustrated thanks to experiments conducted on a realistic phantom dataset as well as real EELS spectrum-images.

Item Type:Article
Additional Information:Thanks to IEEE editor. The definitive version is available at http://ieeexplore.ieee.org The original PDF can be found at IEEE Transactions on Computational Imaging Electronic (ISSN: 2333-9403) website : https://ieeexplore.ieee.org/document/8447232 Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
HAL Id:hal-02181994
Audience (journal):International peer-reviewed journal
Uncontrolled Keywords:
Institution:French research institutions > Centre National de la Recherche Scientifique - CNRS (FRANCE)
Université de Toulouse > Institut National Polytechnique de Toulouse - INPT (FRANCE)
Université de Toulouse > Université Toulouse III - Paul Sabatier - UPS (FRANCE)
Université de Toulouse > Université Toulouse - Jean Jaurès - UT2J (FRANCE)
Université de Toulouse > Université Toulouse 1 Capitole - UT1 (FRANCE)
Other partners > Université Paris-Sud 11 (FRANCE)
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CNRS : Centre national de la recherche scientifique (France)
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Deposited By: IRIT IRIT
Deposited On:25 Jun 2019 12:39

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